Emory University - Reproducible Templates for Analysis and Dissemination
- Offered byCoursera
Reproducible Templates for Analysis and Dissemination at Coursera Overview
Duration | 20 hours |
Start from | Start Now |
Total fee | Free |
Mode of learning | Online |
Difficulty level | Beginner |
Official Website | Explore Free Course  |
Credential | Certificate |
Reproducible Templates for Analysis and Dissemination at Coursera Highlights
- Earn a shareable certificate upon completion.
- Flexible deadlines according to your schedule.
Reproducible Templates for Analysis and Dissemination at Coursera Course details
- This course will assist you with recreating work that a previous coworker completed, revisiting a project you abandoned some time ago, or simply reproducing a document with a consistent format and workflow. Incomplete information about how the work was done, where the files are, and which is the most recent version can give rise to many complications. This course focuses on the proper documentation creation process, allowing you and your colleagues to easily reproduce the components of your workflow. Throughout this course, you'll receive helpful demonstrations of RStudio and the R Markdown language and engage in active learning opportunities to help you build a professional online portfolio.
Reproducible Templates for Analysis and Dissemination at Coursera Curriculum
Introduction to Reproducible Research and Dynamic Documentation
Welcome and an Introduction to the Course
Welcome to Week 1!
History and Importance of Reproducibility
Dynamic Documentation and Literate Programming
Components and Examples of Reproducibility
R and RStudio Introduction
Git and Github - Part 1
Git and Github - Part 2
Git and Github - Part 3
Creating Your First Document
Wrap-Up
Course Outline and Grading Information
Articles, Resources, and File Organization Examples
[Lecture Prep] - Links for R and RStudio
R and RStudio Resources
[Lecture Prep] - GIT and GitHub
Books on Reproducibility and Tools of the Trade
Practice
Week 1
R Markdown: Syntax, Document, and Presentation Formats
Welcome to Week 2!
Introduction to R Markdown and the YAML Header
R Markdown Syntax
Figures, Tables, and Equations
Images, Videos, and Footnotes
Presentation Formats
Book Format
Wrap-Up
[Lecture Prep] - Links for R Markdown and YAML
[Lecture Prep] - R Markdown File
R Markdown Resources
Resources for Tables and Equations
[Lecture Prep] - Media and R Markdown Files
Resource for Embedding Videos
[Lecture Prep] - R Markdown File
Resources for the Presentation Format
[Lecture Prep] - Link for Bookdown Demo
Resources for the Book Format
[Graded Quiz Prep] - Week 2 Instructions
Practice
Week 2
R Markdown Templates: Processing and Customizing
Week 3 Introduction
Customizing an HTML Document
Customizing a WORD Document
Customizing Other Document Formats
Working with R Packages
Building a Document Template, Part 1
Building a Document Template, Part 2
Adding Parameters in a Document Template
Wrap-Up
[Lecture Prep] - CSS File
Note on MD files
Resources for Customizing Documents
[Lecture Prep] - R Script File
[Lecture Prep] - Code File
Resources for Parameters and Template Development
Practice
Week 3
Leveraging Custom Templates from Leading Scientific Journals
Week 4 Introduction
Examples and Demo of Existing Templates
Exploring R Packages and Their Components and Files
Create an R Markdown Template and Share It
Create an R Package with an R Markdown Template
Wrap-Up
Custom Template Packages and References
Resources for Packages and Forking Repositories
[Lecture Prep] - Code File
Practice
Week 4
Working in Teams and Disseminating Templates and Reports
Week 5 Introduction
Organizing Components - Files, Documents, and Codes
Disseminate Your Files via RPubs and GitHub
Communicating to Your Team on How to Use Your Templates and Projects
More Ways to Disseminate Your Files
Wrap-Up
[Lecture Prep] - Code File
Resources on Dissemination
Practice
Reproducible Templates for Analysis and Dissemination at Coursera Admission Process
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